Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911570.1_cds_XP_016461558.1_54866
CDS Infomation

[gene=LOC107784882] [db_xref=GeneID:107784882] [protein=laccase-12-like] [protein_id=XP_016461558.1] [location=complement(join(65497..65627,65743..66699,66861..66989,67125..67369,67490..67641,67733..67843))] [gbkey=CDS]
Sequence

ATGGAGGCTTTCAAAAGCATTGCCAACCCTTTGAGTTCTTTCTTCTTTATATGCATTTTG
CTTCTCTCGGCAAATGCGGCATCTGCGAAAACTCACTACCATGATTTTGTTATTCAAGCA
ACACCAGTGAAGAGGCTGTGCAAAACTCACAACACCATAACGGTGAACGGACAATTCCCT
GGACCAACACTGGAAGTAAACAACGGGGACACTCTCGTTGTAAACGTTGTCAACAAAGCT
CGATATAATGTCACTATTCACTGGCATGGAGTAAGGCAAATGAGAACAGGATGGGCAGAT
GGACCAGAATTTGTCACTCAGTGTCCGATTAGACCAGGAAAGAGTTACACTTACCAGTTT
ACAATTCAAGGACAGGAAGGAACTCTCTGGTGGCATGCTCACAGCTCGTGGCTCAGGGCT
ACGGTTTATGGAGCTCTAATAATCCATCCAAAAGAAGGAGAATCCTATCCATTTGTTAAG
CCCAAAAGAGAAACACCAATTATGCTTGGTGAGTGGTGGGATACAAACCCTATTGACGTT
GTAAGACGAGCAACAAGAACAGGAGCAGCTCCAAATGTATCTGATGCATACACCATCAAT
GGTCAACCAGGTGATCTCTACAAGTGTTCAAGTAAAGATACCACCACAGTCCATGTGGAC
ACTGGCGAAACCAACCTCCTCCGAGTTATCAATGCTGCACTCAATCAACAACTTTTCTTT
ACTGTGGCCAACCACAAGCTTACTGTTGTTGGAGCAGATGCCTCTTATGTTAAACCCTTC
ACAACATCAGTCCTTATGCTCGGACCAGGCCAGACAACTGATGTCCTGATCAAAGCCGAC
CAGCAACCAGCCAAATACTACATGGCAGCACGTGCCTACGCAAGTGCTCAAGGCGCCCCT
TTTGATAATACCACTACCACTGCCATCCTTGAGTACAAGACATCTTCTTGTTCTTTGAAT
TGTGTCAAGACAAATCCAGTTTCCCCATCTTTACCAGCATATAATGACACGGCCACTGCA
ACAGCCTTCACAACCAAATTCAGAAGCCCAAGAAAGGTCGAGGTGCCCACTGATATCGAC
GAAAATCTGTTCTTCACTGTTGGGCTAGGACTCAACAACTGCCCAAGAGGCGCTCGCTCC
AGAAACTGTCAAGGTCCAAATGGAACTAGATTCACTGCCAGTATGAACAACGTATCATTT
GTTCTACCATCCAACTTTTCACTGCTACAAGCACATCACCAAGGCATACCTGGTGTATTC
TCAACTGATTTTCCAGCAAAACCACCTGTAAAATTTGATTATACAGGCAATGTAAGCCGG
TCACTATGGCAACCTATTCGAGGAACAAAGCTGTACAAGCTGAAATATGGGGCAAGAGTG
CAAGTTGTGTTACAGGGGACAAGTATATTCACAGCTGAAAACCACCCAATTCATCTTCAC
GGATATGATTTTTACATCATTGCAGAGGGTTTCGGTAACTTTAATCCAAAAAGAGATGCA
GCTAAATTCAACCTTGTTGATCCACCTCTCAGGAACACGGCCAGTGTACCCGTCAAAGGA
TGGGCAGTTATCAGATTCGTTGCGGACAATCCAGGAGTGTGGCTAATGCACTGTCACTTG
GATGTTCACATTGGCTGGGGTTTGGGCATGGCGTTCATCGTCGAAAACGGAGTTAGTGAA
TTGGAATCATTGGAGGCTCCTCCAGTAGATCTTCCTGTCTGTTGA

Peptide Sequence

PEP ID

XP_016461558.1
PEP Infomation

PREDICTED: laccase-12-like [Nicotiana tabacum]
Sequence

MEAFKSIANPLSSFFFICILLLSANAASAKTHYHDFVIQATPVKRLCKTHNTITVNGQFP
GPTLEVNNGDTLVVNVVNKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGKSYTYQF
TIQGQEGTLWWHAHSSWLRATVYGALIIHPKEGESYPFVKPKRETPIMLGEWWDTNPIDV
VRRATRTGAAPNVSDAYTINGQPGDLYKCSSKDTTTVHVDTGETNLLRVINAALNQQLFF
TVANHKLTVVGADASYVKPFTTSVLMLGPGQTTDVLIKADQQPAKYYMAARAYASAQGAP
FDNTTTTAILEYKTSSCSLNCVKTNPVSPSLPAYNDTATATAFTTKFRSPRKVEVPTDID
ENLFFTVGLGLNNCPRGARSRNCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHQGIPGVF
STDFPAKPPVKFDYTGNVSRSLWQPIRGTKLYKLKYGARVQVVLQGTSIFTAENHPIHLH
GYDFYIIAEGFGNFNPKRDAAKFNLVDPPLRNTASVPVKGWAVIRFVADNPGVWLMHCHL
DVHIGWGLGMAFIVENGVSELESLEAPPVDLPVC

Transcript Sequence

Gene sequence data has not been registered.